发表文章

发布者:张志毅发布时间:2024-09-18浏览次数:20

序号论文题目所有作者发表年月期刊IF分区
1RMBase v3.0: decode the landscape, mechanisms and functions of RNA modifications Jiajia Xuan, Lifan Chen, Zhirong Chen, Junjie Pang, Junhong Huang, Jinran Lin,Lingling Zheng, Bin Li, Lianghu Qu, Jianhua Yang 2024.1Nucleic Acids Research16.61区
2Transcriptomic crosstalk between viral and host factors drives aberrant homeostasis of T-cell proliferation and cell death in HIV-infected immunological non-respondersTang S, Lu Y, Sun F, Qin Y, Harypursat V, Deng R, Zhang G, Chen Y, Wang T.2024.5Journal of Infection14.32区
3EML4-ALK fusions drive lung adeno-to-squamous transition through JAK-STAT activation.Qin Z, Yue M, Tang S, Wu F, Sun H, Li Y, Zhang Y, Izumi H, Huang H, Wang W, Xue Y, Tong X, Mori S, Taki T, Goto K, Jin Y, Li F, Li FM, Gao Y, Fang Z, Fang Y, Hu L, Yan X, Xu G, Chen H, Kobayashi SS, Ventura A, Wong KK, Zhu X, Chen L, Ren S, Chen LN, Ji H2024.1Journal of Experimental Medicine12.61区
4Two synonymous single-nucleotide polymorphisms promoting fluoroquinolone resistance of Escherichia coli in the environment.Zhong T, Wu H, Hu J, Liu Y, Zheng Y, Li N, Sun Z, Yin XF, He QY, Sun X2024.5JOURNAL OF HAZARDOUS MATERIALS12.21区
5Unveiling a novel mechanism for competitive advantage of ciprofloxacin-resistant bacteria in the environment through bacterial membrane vesicles.Fang Z, Zhao X, Zhang Z, Wu J, Cheng J, Lei D, Li N, Ge R, He QY, Sun X2024.1JOURNAL OF HAZARDOUS MATERIALS12.21区
6Human/mouse CD137 agonist, JNU-0921, effectively shrinks tumors through enhancing the cytotoxicity of CD8+ T cells in cis and in transLiu L, Chen F, Li S, Yang T, Chen S, Zhou Y, Lin Z, Zeng G, Feng P, Shu HB, Zhou Q, Ding K, Chen L.2024.8Science Advances11.71区
7HnRNPR-mediated UPF3B mRNA splicing drives hepatocellular carcinoma metastasisWang H, Qian D, Wang J, Liu Y, Luo W, Zhang H, Cheng J, Li H, Wu Y, Li W, Wang J, Yang X, Zhang T, Han D, Wang Q, Zhang CZ, Liu L.2024.2Journal of Advanced Research11.41区
8A Interacting Model: How TRIM21 Orchestrates with Proteins in Intracellular ImmunityYisha Huang, Xuejuan Gao, Qing-Yu He, Wanting Liu2024.1Small Methods10.71区
9PTPLAD1 Regulates PHB-Raf Interaction to Orchestrate Epithelial-Mesenchymal and Mitofusion-Fission Transitions in Colorectal CancerHuang ZJ, Li YJ, Yang J, Huang L, Zhao Q, Lu YF, Hu Y, Zhang WX, Liang JZ, Pan J, Pan YL, He QY, Wang Y.2024.3International Journal of Biological Sciences8.22区
10YjgM is a crotonyltransferase critical for polymyxin resistance of Escherichia coliZhuang J, Liu S, Du GF, Fang Z, Wu J, Li N, Zhong T, Xu J, He QY, Sun X. 2024.5Cell reports7.51区
11Copy number variation of NAL23 causes narrow-leaf development in riceZhou D, Li Y, Xie X, Ding W, Chen L, Li T, Tang J, Tan X, Liu W, Heng Y, Xie Y, Chen L, Liu Q, Zhou S, Zhao J, Zhang G, Tan J, Liu Y, Shen R. 2024.8Journal of Genetics and Genomics6.62区
12LAFEM: A Scoring Model to Evaluate Functional Landscape of Lysine AcetylomeJun-Ze Liang ,De-Hua Li ,Yong-Chun Xiao  Qian-Ying Liao  Yang Wang  Qing-Yu He 2024.1Molecular & Cellular Proteomics6.12区
13Repurposing cinacalcet suppresses multidrug-resistant Staphylococcus aureus by disruption of cell membrane and inhibits biofilm by targeting IcaRFang ZY, Zhang ZY, Zheng YD, Lei D, Zhuang J, Li N, He QY, Sun X. 2024.2JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY3.9 2区
14Pan-Cancer Proteomics Analysis Reveals Wiskott–Aldrich Syndrome Protein as a Potential Regulator of Programmed Death-Ligand 1Hu L, Liu D, Zheng D, Lu J, Yuan X, Li Y, Shi F, Shi X, He QY, Li Q, Zhang CZ. 2024.6Journal Of Proteome Research3.82区
15Pirin Promotes the Progression of Non-Small-Cell Lung Cancer by Increasing ODC1 to Suppress AutophagyYan-Ping Li, Zi-Jia Huang, Quan-Kuo He, Yi-Xiang Li, Xiang-Pei Zhao, Zhong-Qi Ma, Mei-Jing Qin, Ai-Wen Chen, Qiu Wei, Yang Wang, and Chun-Hua Lu2024.5Journal Of Proteome Research3.82区
16Identifying PE2 and PE5 Proteins from Existing Mass Spectrometry Data Using pFindQianzhou Wei, Jiamin Li, Qing-Yu He, Yang Chen, and Gong Zhang*2024.7Journal Of Proteome Research3.82区
17AlphaFun: Structural-Alignment-Based Proteome Annotation Reveals why the Functionally Unknown Proteins (uPE1) Are So Understudied Hengxin Pan, Zhengi Wu, Wanting Liu*, and Gong Zhang*2024.5Journal of Proteome Research3.82区
18Consensus statement on extracellular vesicles in liquid biopsy for advancing laboratory medicineXingli Dong, Yusheng Lin, Kai Li, Gaofeng Liang, Xiaoyi Huang, Jingxuan Pan, Lu Wang, Dongmei Zhang, Tingjiao Liu, Tong Wang, Xiaomei Yan, Long Zhang, Xiaowu Li, Xiujuan Qu, Da Jia, Yong Li, Hao Zhang2024.6Clinical Chemistry And Laboratory Medicine (cclm)3.83区
19Immune cell patterns before and after neoadjuvant immune checkpoint blockade combined with chemoradiotherapy in locally advanced esophageal squamous cell carcinomaDan-Dan Zheng, Yu-Ying Li1, Xiao-Yi Yuan , Jiang-Li Lu , Mei-Fang Zhang, Jia Fu and Chris Zhiyi Zhang2024.5BMC Cancer3.43区
20Artesunate induces ferroptosis by regulating MT1G and has an additive effect with doxorubicin in diffuse large B-cell lymphoma cellsDan Xiong 1 Chengjie Geng 1 Liyi Zeng Hua Yao Jiewen Tan Lan Zhang  Xiaohui Liu2024.3Heliyon3.43区
21Molecular Transmission Network and Drug Resistance in Treatment-Naive HIV-1-Infected Patients in the Liangshan District, China Bianchuan Cao, Caihong Wu, Mei Liu, Shaofang Song, Tao Wu, Tianru Yuan, Ping Ding, Tong Wang, and Li Zhong2024.8AIDS Research and Human Retroviruses1.54区
22RMBase v3.0: decode the landscape, mechanisms and functions of RNA modificationsXuan J, Chen L, Chen Z, Pang J, Huang J, Lin J, Zheng L, Li B, Qu L, Yang J2023.11Nucleic Acids Research16.61区
23CDK4/6 inhibition triggers ICAM1-driven immune response and sensitizes LKB1 mutant lung cancer to immunotherapyXue Bai , Ze-Qin Guo, Yan-Pei Zhang, Zhen-zhen Fan,Li-Juan Liu, Li Liu, Li-Li Long, Si-Cong Ma, Jian Wang, Yuan Fang 1,Xin-Ran Tang, Yu-Jie Zeng, Xinghua Pan , De-Hua Wu  &Zhong-Yi Dong2023.3nature communications14.71区
24Polyphyllin D punctures hypertrophic lysosomes to reverse drug resistance of hepatocellular carcinoma by targeting acid sphingomyelinaseWang Y, Chen YY, Gao GB, Zheng YH, Yu NN, Ouyang L, Gao X, Li N, Wen SY, Huang S, Zhao Q, Liu L, Cao M, Zhang S, Zhang J, He QY.2023.5Molecular Therapy12.11区
25Genome-wide CRISPR/Cas9 screening identifies a targetable MEST-PURA interaction in cancer metastasisWen Wen Xu,Long Liao,Wei Dai, Can-Can Zheng, Xiang-Peng Tan,Yan He, Qi-Hua Zhang,Zhi-Hao Huang,Wen-You Chen, Yan-Ru Qin,Kui-Sheng Chen, Ming-Liang He,Simon Law,iMaria Li Lung, Qing-Yu He, and Bin Li2023.5Ebiomedicine9.72区
26Genetically engineered PD-1 displaying nanovesicles for synergistic checkpoint blockades and chemo-metabolic therapy against non-small cell lung cancer.Li B, Yang T, Liu J, Yu X, Li X, Qin F, Zheng J, Liang J, Zeng Y, Zhou Z, Liu L, Zhang B, Yao W, Feng Z, Zeng G, Zhou Q, Chen L. 2023.3 Acta Biomaterialia9.41区
27LINC00493‐encoded microprotein SMIM26 exerts anti‐metastatic activity in renal cell carcinomaKun Meng , Shaohua Lu, Yu-Ying Li, Li-Ling Hu, Jing Zhang, Yun Cao, Yang Wang,Chris Zhiyi Zhang,Qing-Yu He2023.8EMBO reports6.5 1区
28Histone deacetylase inhibitor pracinostat suppresses colorectal cancer by inducing CDK5-Drp1 signaling-mediated peripheral mitofission Liang, X.L. 1, Ouyang, L. 1, Yu, N.N, Sun, Z.H., Gui, Z.K., Niu, Y.L., He, Q.Y.*, Zhang, J.*, Wang, Y.*2023.6Journal of Pharmaceutical Analysis.6.12区
29A multi-omics dataset of human transcriptome and proteome stable referenceShaohua Lu, Hong Lu, Tingkai Zheng, Huiming Yuan, Hongli Du, Youhe Gao, Yongtao Liu, Xuanzhen Pan, Wenlu Zhang, Shuying Fu, Zhenghua Sun, Jingjie Jin, Qing-Yu He, Yang Chen, Gong Zhang2023.7Scientific Data5.8 2区
306-Mercaptopurine potently inhibits recruitment of SHP2 by phosphorylated PD-1 to inhibit PD-1 signalling and enhance T cell functionLu Liu, Yuxi Lei, Zongyao Zheng, Xingang Zhou, Shuzhen Chen, Guandi Zeng, Lei Yu, Peng Wang, Liang Chen2023.6immunology4.92区
31Exosomal PPARγ derived from macrophages suppresses LPS-induced peritonitis by negative regulation of CD14/TLR4 axisMeng Meng, Meizhi Lu, Junxia Feng, Xiaoying Zhou, Ping Meng, Luxuan Chen, Xunliang Zou, Xiaohui Liu, Langxia Liu, Xuejuan Gao, Yunfang Zhang2023.7Inflammation Research4.8 3区
32EFHD1, a novel mitochondrial regulator of tumor metastasis in clear cell renal cell carcinomaKun Meng, Yuyu Hu, Dingkang Wang, Yuying Li, Fujin Shi, Jiangli Lu, Yang Wang, Yun Cao, Chris Zhiyi Zhang, Qing-Yu He
2023.5cancer  science4.52区
33Proteome-wide analysis reveals TFEB targets for establishment of a prognostic signature to predict clinical outcomes of colorectal cancerZijia Huang, Sheng Zhu, Ziqin Han, Chen Li, Junze Liang, Yang Wang , Shuixing Zhang ,and Jing Zhang2023.1cancers4.52区
34Systems crosstalk between antiviral response and cancerous pathways via extracellular vesicles in HIV-1-associated colorectal cancerZimei Chen , Ke Yang , Jiayi Zhang , Shufan Ren , Hui Chen , Jiahui Guo , Yizhi Cui , Tong Wang , Min Wang2023.6Computational and Structural Biotechnology Journal4.4 2区
35A hypoxia-derived gene signature to suggest cisplatin-based therapeutic responses in patients with cervical cancerFang J, Wang Y, Li C, Liu W, Wang W, Wu X, Wang Y, Zhang S, Zhang J2023.6Computational and Structural Biotechnology Journal4.42区
36A five-protein prognostic signature with GBP2 functioning in immune cell infiltration of clear cell renal cell carcinomaMeng K, Li YY, Liu DY, Hu LL, Pan YL, Zhang CZ, He QY. 2023.4Comput Struct Biotechnol J4.42区
37Residue Lys219 of CpxR is critical in the regulation of the antibiotic resistance of Escherichia coli. Lei D, Cao L, Zhong T, He QY, Sun X.2023.8JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY3.92区
38ZSWIM1 Promotes the Proliferation and Metastasis of Lung Adenocarcinoma Cells through the STK38/MEKK2/ERK1/2 AxisXuejuan Gao, Qionghua Lian, Baiye Guan, Qiu-Yu Liu , Meng Meng, Yang Chen, Jingjie Jin, Huihua Li, Xiaohui Liu, Zhenghua Sun, Langxia Liu, Qing-Yu He, Gong Zhang2023.8J Proteome Res3.82区
39HIV-1 DNA drug resistance testing to guide successful suppression of low-level viraemia: a case reportBianchuan Cao, Mei Liu, Rui Zhu, Tianru Yuan, A"shamu E"er, Shaofang Song, Tong Wang , Li Zhong2023.12Sexually Transmitted Infections3.6 3区
40Experimental assessment of robust reference genes for qRT-PCR in lung cancer studiesWei Gu, Yubin Wang, Ran Xu, Jiamin Li, Jingjie Jin, Jing Zhao, Yang Chen, Yuanzhi Lu, Gong Zhang2023.5Frontiers In Oncology3.5 2区
41GSK3β/ITCH/c-FLIP Axis Counteracts TRAIL-induced Apoptosis in Human Lung Adenocarcinoma CellsXiaofen Zheng, Donglan Huang, Xiaohui Liu, Qiu-Yu Liu, Xuejuan Gao , Langxia Liu2023.11Protein Pept Lett14区
42 E3 ubiquitin ligase-dependent regulatory mechanism of TRIM family in carcinogenesisGui Zhang, Yunfang Zhang, Luxuan Chen, Langxia Liu, Xuejuan Gao2023.5Cancer Insight

43Alteration of mitochondrial protein succinylation against cellular oxidative stress in cancerJing Zhang, Zi Qin Han, Yang Wang and Qing Yu He2022.2Military Medical Research16.72区
44Targeting PFKL with penfluridol inhibits glycolysis and suppresses esophageal cancer tumorigenesis in an AMPK/FOXO3a/BIM-dependent manner.Zheng C, Yu X, Liang Y, Zhu Y, He Y, Liao L, Wang D, Yang Y, Yin X, Li A, He Q, Li B.2022.3Acta Pharm Sin B14.71区
45Blockade of Nuclear β-Catenin Signaling via Direct Targeting of RanBP3 with NU2058 Induces Cell Senescence to Suppress Colorectal Tumorigenesis. Zheng CC, Liao L, Liu YP, Yang YM, He Y, Zhang GG, Li SJ, Liu T, Xu WW, Li B. 2022.12 Adv Sci (Weinh). 14.31区
46Highly bioactive iridium metal-complex alleviates spinal cord injury via ROS scavenging and inflammation reductionJi ZS, Gao GB, Ma YM, Luo JX, Zhang GW, Yang H, Li N, He QY*, Lin HS.2022.4Biomaterials12.81区
47Anti-HIV drug elvitegravir suppresses cancer metastasis via increased proteasomal degradation of m6A methyltransferase METTL3Liao L, He Y, Li SJ, Zhang GG, Yu W, Yang J, Huang ZJ, Zheng CC, He QY, Li Y, Li B*2022.5Cancer Res.12.51区
48Targeting ARF1-IQGAP1 interaction to suppress colorectal cancer metastasis and vemurafenib resistanceHui-Fang Hu, Gui-Bin Gao, Xuan He, Yu-Ying Li, Yang-Jia Li, Bin Li, YunLong Pan, Yang Wang, Qing-Yu He 2022.11Journal of Advanced Research11.42区
49Inhibition of nuclear deacetylase Sirtuin-1 induces mitochondrial acetylation and calcium overload leading to cell death Sun Y, Yang YM, Hu YY, Ouyang L, Sun ZH, Yin XF, Li N, He QY, Wang Y. 2022.7 Redox Biol. 10.71区
50 Carfilzomib modulates tumor microenvironment to potentiate immune checkpoint therapy for cancerZhou Q, Liang J, Yang T, Liu J, Li B, Li Y, Fan Z, Wang W, Chen W, Yuan S, Xu M, Xu Q, Luan Z, Xia Z, Zhou P, Huang Y, Chen L. 2022.1EMBO Mol Med.91区  
51C20orf24 promotes colorectal cancer progression by recruiting Rin1 to activate Rab5-mediated mitogen activated protein kinase/extracellular signal-regulated kinase signallingYang Wang, Jing Zhang, Can-Can Zheng, Wei-Xia Zhang, Yun-Lin Long, Gui-Bin Gao, Yue Sun, Wen Wen Xu, Bin Li, Qing-Yu He2022.3Clinical Translational Medcine7.91区
52Highly Robust de Novo Full-Length Protein Sequencing.Zhi-Biao Mai, Zhong-Hua Zhou, Qing-Yu He, Gong Zhang*2022.2Analytical Chemistry6.72区
53In vivo genome-wide CRISPR screening identifies ZNF24 as a negative NF-kappaB modulator in lung cancer. Liu L, Lei Y, Chen W, Zhou Q, Zheng Z, Zeng G, Liu W, Feng P, Zhang Z, Yu L, Chen L.2022.12Cell Biosci.6.12区
54Strategies for developing PD-1 inhibitors and future directions. Chen WS, Huang Y, Pan WT, Xu M, Chen L.2022.8Biochem Pharmacol.5.32区
55Potential Role of Lysine Acetylation in Antibiotic Resistance of Escherichia coliFang Z, Lai F, Cao K, Zhang Z, Cao L, Liu S, Duan Y, Yin X, Ge R, He QY, Sun X. 2022.12mSystems52区
56Identification and Tetramer Structure of Hemin-Binding Protein SPD_0310 Linked to Iron Homeostasis and Virulence of Streptococcus pneumoniae Kun Cao , Tianlong Zhang, Nan Li, Xiao-Yan Yang, Jianping Ding, Qing-Yu He, Xuesong Sun2022.6mSystems52区
57Editorial: Emerging Proteins and Polypeptides Expressed by “Non-Coding RNAs”wanting liu , qing-yu he, Marie Brunet2022.2Frontiers in Cell and Developmental Biology 4.62区
58SPD_0090 Negatively Contributes to Virulence of Streptococcus pneumoniaeCao L, Li N, Dong Y, Yang XY, Liu J, He QY, Ge R, Sun X.2022.6Front Microbiol42区
59Genome recombination-mediated tRNA up-regulation conducts general antibiotic resistance of bacteria at early stageHuiying Fang, Guandi Zeng, Jing Zhao, Tingkai Zheng, Lina Xu, Wei Gu, Yutong Liu, Jinning Zhang, Xuesong Sun *, Gong Zhang *2022.1Frontiers in Microbiology 42区
60DDX17 promotes the growth and metastasis of lung adenocarcinomaLiu X, Li L, Geng C, Wen S, Zhang C, Deng C, Gao X, Zhang G, He QY, Liu L.2022.1Cell Death Discov3.92区
61Efficient Detection of the Alternative Spliced Human Proteome Using Translatome SequencingChun Wu, Xiaolong Lu, Shaohua Lu, Hongwei Wang, Dehua Li, JIng Zhao, Jingjie JIn, Zhenghua Sun, Qing-Yu He, Yang Chen *, Gong Zhang *2022.6Frontiers in Molecular Biosciences3.92区
62Screening of the Key Genes and Signalling Pathways for Diabetic Nephropathy Using Bioinformatics AnalysisLi Z, Feng J, Zhong J, Lu M, Gao X, Zhang Y2022.7 Front Endocrinol (Lausanne)3.92区
63Proteomic Study of the Adaptive Mechanism of Ciprofloxacin-Resistant Staphylococcus aureus to the Host Environment Liu J, Wei Q, Wang Z, Sun X, He QY.2022.6J Proteome Res3.82区
64 ZSWIM1 Promotes the Proliferation and Metastasis of Lung Adenocarcinoma Cells through the STK38/MEKK2/ERK1/2 Axis.Gao X, Lian Q, Guan B, Liu QY, Meng M, Chen Y, Jin J, Li H, Liu X, Sun Z, Liu L, He QY, Zhang G.2022.12J Proteome Res.3.82区
65Crizotinib Shows Antibacterial Activity against Gram-Positive Bacteria by Reducing ATP Production and Targeting the CTP Synthase PyrGZheng YD, Zhong T, Wu H, Li N, Fang Z, Cao L, Yin XF, He QY, Ge R, Sun X.2022.6Microbiol Spectr3.72区
66PPARγ alleviates peritoneal fibrosis progression along with promoting GLUT1 expression and suppressing peritoneal mesothelial cell proliferationFeng J, Lu M, Li W, Li J, Meng P, Li Z, Gao X, Zhang Y2022.7 Mol Cell Biochem3.53区
67Towards an accurate and robust analysis pipeline for somatic mutation callingJin, Jingjie; Chen, Zixi; Liu, Jinchao; Du, Hongli; Zhang, Gong2022.11Front Genet2.83区
68Comparison of RNAscope and immunohistochemistry for evaluation of the UPK2 status in urothelial carcinoma tissuesLu J, Zhao M, Wu C, Chu C, Zhang CZ, Cao Y.2022.1Diagn Pathol.2.44区
69An Integrated Workflow of Identification and Quantification on FDR Control-Based Untargeted MetabolomeDehua Li, Junze Liang, Yongjian Zhang, Gong Zhang *2022.9JOVE1.24区